Ricardo Wurmus
1a97739bda
guix: Update Bioconductor version to 3.22.
...
* guix/build-system/r.scm (bioconductor-uri): Update to 3.22.
* guix/import/cran.scm (%bioconductor-version): Set to 3.22.
Change-Id: I53c6b0d1ddc37faad90492103b7d02c210f945d7
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
8b7a0cdc98
gnu: r-extrafont: Add test input.
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* gnu/packages/cran.scm (r-extrafont)[native-inputs]: Add r-testthat.
Change-Id: I8d629cbbde3a8668681ad3e8d556d496f9e1744f
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
e8609b3805
gnu: r-extrafontdb: Add test input.
...
* gnu/packages/cran.scm (r-extrafontdb)[native-inputs]: Add r-testthat.
Change-Id: I8e5a77dbee00f03ba2bf0ce447d1a8f578f98c50
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
fe8a55c0f1
gnu: r-rttf2pt1: Add test inputs.
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* gnu/packages/cran.scm (r-rttf2pt1)[native-inputs]: Add r-testthat and
r-withr.
Change-Id: I3c5781fb53c03a5ed3bc817212a0a8fe881057e5
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
3b5f808fea
gnu: r-readr: Update to 2.1.6.
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* gnu/packages/statistics.scm (r-readr): Update to 2.1.6.
[native-inputs]: Add r-dplyr, r-spelling, and r-withr.
Change-Id: I4be3fe4c30747a282cb03a1e825074d5cd2583f2
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
98059912dd
gnu: r-duckdb: Update to 1.4.2.
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* gnu/packages/duckdb.scm (r-duckdb): Update to 1.4.2.
Change-Id: I7f8c65d1e994906a27dc05610934d4136e1afa50
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
e8224f3e81
gnu: r-paws-common: Update to 0.8.6.
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* gnu/packages/cran.scm (r-paws-common): Update to 0.8.6.
Change-Id: I4e5c8365d652ab63c7ea99f9d02523a555274d8e
2025-11-29 12:20:15 +01:00
Ricardo Wurmus
93ef3bbcb8
gnu: r-downlit: Update to 0.4.5.
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* gnu/packages/cran.scm (r-downlit): Update to 0.4.5.
[native-inputs]: Add r-htmltools, r-knitr, r-mass, r-rmarkdown, and r-xml2.
Change-Id: Iee0654344931fecf951d8b5416339fcb9203e990
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
b9351be9d9
gnu: r-mlr3cluster: Update to 0.1.12.
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* gnu/packages/cran.scm (r-mlr3cluster): Update to 0.1.12.
Change-Id: Ib49a5abc91b5db0c7544d2ed8e83bb2a33b6278c
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
3532391ccc
gnu: r-locpol: Update to 0.9.0.
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* gnu/packages/cran.scm (r-locpol): Update to 0.9.0.
Change-Id: I738d5a9a8cec2a65a3f9006b9f019000db6f5514
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
36fba42be4
gnu: r-qtl: Update to 1.72.
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* gnu/packages/cran.scm (r-qtl): Update to 1.72.
Change-Id: Id4d13b3ec65a692c0c36963a7dc44131235ab24e
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
bf3b1a041e
gnu: r-slider: Update to 0.3.3.
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* gnu/packages/cran.scm (r-slider): Update to 0.3.3.
Change-Id: Id51f0dbd6e9ff7dafce8715975fb1fcae5d808b0
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
c2abe13b8f
gnu: r-warp: Update to 0.2.2.
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* gnu/packages/cran.scm (r-warp): Update to 0.2.2.
[native-inputs]: Add r-withr.
[properties]: Record updater-extra-native-inputs.
Change-Id: I34259c20df4f50505f31abd9d0cb768dd591494e
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
a7c3a9cba8
gnu: r-lobstr: Update to 1.1.3.
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* gnu/packages/cran.scm (r-lobstr): Update to 1.1.3.
Change-Id: I055205206321b92ef994d47b1b80b2a6f06501fb
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
b72bc202a5
gnu: r-spatstat-geom: Update to 3.6-1.
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* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.6-1.
Change-Id: I595fd49b1f988e7afd60c19e60862de2445f7654
2025-11-29 12:20:14 +01:00
Ricardo Wurmus
8a9b10754d
gnu: r-spatstat-univar: Update to 3.1-5.
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* gnu/packages/cran.scm (r-spatstat-univar): Update to 3.1-5.
Change-Id: Id6e618991f0fd7921b24029440431912c40cc5ea
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
abe7e2d34a
gnu: r-bridgesampling: Update to 1.2-1.
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* gnu/packages/cran.scm (r-bridgesampling): Update to 1.2-1.
[native-inputs]: Add r-cmdstanr, r-mcmcpack, r-rcpp, and r-rstan.
Change-Id: I5e2153752c81b7f93ab651c9cc47ea94c0928566
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
3b652c53fd
gnu: r-rsconnect: Update to 1.6.2.
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* gnu/packages/cran.scm (r-rsconnect): Update to 1.6.2.
Change-Id: I130aa67a4f74976a746df89b1d1cc9c69cd32c6b
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
86b67fee09
gnu: r-xml2: Update to 1.5.0.
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* gnu/packages/cran.scm (r-xml2): Update to 1.5.0.
Change-Id: I3d6310cf5aa4b505a54f13f939d928a4b7c08b72
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
73d1898d69
gnu: r-ggpointdensity: Update to 0.2.1.
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* gnu/packages/cran.scm (r-ggpointdensity): Update to 0.2.1.
[propagated-inputs]: Add r-mass.
Change-Id: I11d53befd0a93bdced2119d7ec0981a36c7e0c1f
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
ab5fa5d9e8
gnu: r-xkcd: Update to 0.1.0.
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* gnu/packages/cran.scm (r-xkcd): Update to 0.1.0.
[propagated-inputs]: Add r-rlang.
Change-Id: I76b047d46f0782c73088881f14580b7f02a9a6b3
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
7fb6d6c65e
gnu: r-future: Update to 1.68.0.
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* gnu/packages/cran.scm (r-future): Update to 1.68.0.
Change-Id: I8b89791ac957821c83bf68f57bbb35265194e686
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
dcfb30ad9a
gnu: r-rgl: Update to 1.3.31.
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* gnu/packages/cran.scm (r-rgl): Update to 1.3.31.
Change-Id: I2e7ee1a913a27b1d0aa176c2ee096b44bbab1aa0
2025-11-29 12:20:13 +01:00
Ricardo Wurmus
f3f7186a35
gnu: r-biocmanager: Update to 1.30.27.
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* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.27.
Change-Id: Ic9c27b9222327fda1219874b844cdade54cc3a67
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
3e2aa9a827
gnu: r-gert: Update to 2.2.0.
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* gnu/packages/cran.scm (r-gert): Update to 2.2.0.
[inputs]: Add pcre2.
Change-Id: Ia5d0d56b4047dc40cf99d79f3fcf075ac58ea420
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
98befda987
gnu: r-th-data: Update to 1.1-5.
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* gnu/packages/cran.scm (r-th-data): Update to 1.1-5.
Change-Id: I0c93238bdf22a4af9a83a241567a95650b32a396
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
011b4f5046
gnu: r-officer: Update to 0.7.1.
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* gnu/packages/cran.scm (r-officer): Update to 0.7.1.
[propagated-inputs]: Add r-dplyr and r-tidyr.
Change-Id: Iaff91b337b38f1366247b5b7580cb2904abfecbb
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
21c4bf1428
gnu: r-fansi: Update to 1.0.7.
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* gnu/packages/cran.scm (r-fansi): Update to 1.0.7.
[native-inputs]: Add r-unitizer.
Change-Id: Ia91dcd610004bb168193978a5ee7695fce96a0f8
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
5cdc2ce2b7
gnu: r-reticulate: Update to 1.44.1.
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* gnu/packages/cran.scm (r-reticulate): Update to 1.44.1.
Change-Id: Ie6f6da421560bf190aeea4666a5e90904393f7ae
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
2e26653abf
gnu: r-adbcdrivermanager: Update to 0.21.0.
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* gnu/packages/cran.scm (r-adbcdrivermanager): Update to 0.21.0.
Change-Id: Idb6167426654fda4c11cd9442e7e4de63310d704
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
2c9189a3e3
gnu: r-s7: Update to 0.2.1.
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* gnu/packages/cran.scm (r-s7): Update to 0.2.1.
[native-inputs]: Remove r-name.
Change-Id: Icca504a714ebc2ca87dbf48715c7d19961b88b5e
2025-11-29 12:20:12 +01:00
Ricardo Wurmus
7a6fcd9312
gnu: r-tinytex: Update to 0.58.
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* gnu/packages/cran.scm (r-tinytex): Update to 0.58.
Change-Id: I44e20b39af77e68519322738aa97ab4cc2bd5728
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
9101c7b28f
gnu: r-gss: Update to 2.2-10.
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* gnu/packages/cran.scm (r-gss): Update to 2.2-10.
Change-Id: Ie746376e9e383d53a29c13e22de989a48830006c
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
f3da11c331
gnu: r-httptest2: Update to 1.2.2.
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* gnu/packages/cran.scm (r-httptest2): Update to 1.2.2.
Change-Id: I54f4d18a919e59efca7ba2c4cd26e6e194b21d16
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
76f1c90ec5
gnu: r-httptest: Update to 4.2.3.
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* gnu/packages/cran.scm (r-httptest): Update to 4.2.3.
[native-inputs]: Remove r-testthat; add r-pkgload.
Change-Id: Ie663c8741f724bdbf445bd8e486842a4247ac950
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
33354cb815
gnu: r-marginaleffects: Update to 0.31.0.
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* gnu/packages/cran.scm (r-marginaleffects): Update to 0.31.0.
Change-Id: I89c0d78f33db70a9dbcb297af910b962b98521f2
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
141733af71
gnu: r-plotrix: Update to 3.8-13.
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* gnu/packages/cran.scm (r-plotrix): Update to 3.8-13.
Change-Id: I7b3ac802be10f57c2f82186608af6574fc72dd51
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
53cc31eefa
gnu: r-ggplot2: Update to 4.0.1.
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* gnu/packages/cran.scm (r-ggplot2): Update to 4.0.1.
[native-inputs]: Add r-quarto.
Change-Id: I8950dade9b068815f603dee49afcb3c1ba9b7dac
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
b3607573c0
gnu: r-quarto: Remove r-ggplot2.
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* gnu/packages/cran.scm (r-quarto)[properties]: Record
updater-ignored-native-inputs.
[native-inputs]: Remove r-ggplot2.
Change-Id: I95d31f004b9eaac857c32b6299ccf56c4cde380f
2025-11-29 12:20:11 +01:00
Ricardo Wurmus
67c20d04ee
gnu: r-digest: Update to 0.6.39.
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* gnu/packages/cran.scm (r-digest): Update to 0.6.39.
Change-Id: I7b9315ff53977926532ebc4c80deead8bbf12a34
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
78959c736e
gnu: r-collapse: Update to 2.1.5.
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* gnu/packages/cran.scm (r-collapse): Update to 2.1.5.
Change-Id: Ife1bd799670d4020a708cb27a42fd289be5cedaa
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
a0ac846ac9
gnu: r-simr: Update to 1.0.8.
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* gnu/packages/statistics.scm (r-simr): Update to 1.0.8.
[native-inputs]: Remove r-testthat.
Change-Id: I0167293c822582f3b5420b4477e263216316e66c
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
098b7b9e66
gnu: r-tclust: Update to 2.1-2.
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* gnu/packages/statistics.scm (r-tclust): Update to 2.1-2.
Change-Id: I4948cd2046d09011dc248dc41338b919ae44f80c
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
dd72b03a53
gnu: r-trimcluster: Update to 0.2-0.
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* gnu/packages/statistics.scm (r-trimcluster): Update to 0.2-0.
[propagated-inputs]: Add r-tclust.
[native-inputs]: Add r-fpc.
Change-Id: Ice75329475e0a540e28cb8818a738da3da39cf18
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
6945e681e4
gnu: r-statmod: Update to 1.5.1.
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* gnu/packages/statistics.scm (r-statmod): Update to 1.5.1.
Change-Id: I9f02276c2a115bdda14a0e5df204931a03722324
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
867cfdcd97
gnu: r-runit: Update to 0.4.33.1.
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* gnu/packages/statistics.scm (r-runit): Update to 0.4.33.1.
Change-Id: I72515778295f285be09bc1aeef1bb9254743fd0a
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
e6a5be0b83
gnu: r-rsqlite: Update to 2.4.4.
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* gnu/packages/statistics.scm (r-rsqlite): Update to 2.4.4.
Change-Id: I7f6118a0a6651d1b9b344f6ff6b012b8a5aeb7ef
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
f12f7053db
gnu: r-rcpparmadillo: Update to 15.0.2-2.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 15.0.2-2.
Change-Id: I964dcdca5f8aa1dc3ace08f2ed69702d21087d7d
2025-11-29 12:20:10 +01:00
Ricardo Wurmus
25bfc60c38
gnu: r-automap: Update to 1.1-20.
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* gnu/packages/cran.scm (r-automap): Update to 1.1-20.
Change-Id: Ia94a16bbd21303e96218a1d44114dbd4823f33ce
2025-11-29 12:20:09 +01:00
Ricardo Wurmus
2e05a655df
gnu: r-gstat: Update to 2.1-4.
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* gnu/packages/cran.scm (r-gstat): Update to 2.1-4.
Change-Id: I075297e67dc2329c784d3901312d2f772e88e4ad
2025-11-29 12:20:09 +01:00
