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gnu: pigx-scrnaseq: Use Snakemake 5.

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* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace snakemake-7
with snakemake-5.
[arguments]: Set HOME.

Change-Id: I45257e138c4cf468d179ff35b0c705bc73046052
This commit is contained in:
Ricardo Wurmus 2025-05-10 21:41:58 +02:00
parent d6f9f9b585
commit 901020cdeb
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GPG key ID: 197A5888235FACAC
1 changed files with 3 additions and 1 deletions
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gnu/packages/bioinformatics.scm
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@ -18310,6 +18310,8 @@ methylation and segmentation.")
'(modify-phases %standard-phases
(add-before 'configure 'set-additional-environment-variables
(lambda _
;; Needed for tests
(setenv "HOME" "/tmp")
;; Needed because of loompy
(setenv "NUMBA_CACHE_DIR" "/tmp")
;; Needed to capture environment
@ -18329,7 +18331,7 @@ methylation and segmentation.")
python-loompy
pandoc
samtools
snakemake-7
snakemake-5
star-for-pigx
r-minimal
r-argparser