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* gnu/packages/bioinformatics.scm (python-bed-reader): Fix build and enable tests.
[source]{snippet}: Delete bundled website-related javascript.
{patches}: Use the store-cached instead of pooch-cached samples.
[arguments]{tests?}: Enable them.
{cargo-test-flags}: Skip doc tests. Skip failing tests.
{cargo-inputs}: Improve style.
{cargo-development-inputs}: Improve style.
{phases}: Add phases 'set-data-path, 'patch-data-path to use
store-cached samples for library and tests. Rewrite phase
'prepare-python-module to rely more on the existing info in
pyproject.toml. Rewrite phase 'check-python entirely, and
marginaly rewrite phase 'install-python-library to match 'check-python
phase style.
{modules}: Adapt accordingly.
{propagated-inputs}: Remove python-pooch. Add python-scipy.
(bed-sample-files): Add origin, used in python-bed-reader.
* gnu/packages/patches/python-bed-reader-use-store-samples.patch: Add
patch.
* gnu/local.mk: Record patch.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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| .. | ||
| bootloader | ||
| build | ||
| home | ||
| installer | ||
| machine | ||
| packages | ||
| services | ||
| system | ||
| tests | ||
| artwork.scm | ||
| bootloader.scm | ||
| ci.scm | ||
| compression.scm | ||
| home.scm | ||
| image.scm | ||
| installer.scm | ||
| local.mk | ||
| machine.scm | ||
| packages.scm | ||
| services.scm | ||
| system.scm | ||
| tests.scm | ||