mirror of
https://codeberg.org/guix/guix.git
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faac2082a6
* gnu/packages/orange.scm (orange): Update to
44e66283aff4132614ef64a877f9ceef963588a7 commit, providing comparability
with GCC 14 and more. Use G-Expressions.
[source]: Switch to git-fetch.
[arguments] <tests?>: Disable for now.
[phases]{wrap-executable}: Place after 'wrap; adjust to include qtbase
and qtwayland.
[inputs]: Remove python-pyqt, python-pyqtwebengine, python-qtconsole,
qtbase-5, and qtsvg-5; add python-pyqt-6, python-pyqtwebengine-6,
python-packaging, python-xgboost, qtbase, qtsvg, and qtwayand.
[native-inputs]: Add python-recommonmark, python-setuptools, and
python-trubar.
Fixes: guix/guix#2938
Change-Id: I1aeda03087367df1611209738630333eb8a63f67
270 lines
9.6 KiB
Scheme
270 lines
9.6 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2021, 2022 Vinicius Monego <monego@posteo.net>
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;;; Copyright © 2025 Sharlatan Hellseher <sharlatanus@gmail.com>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages orange)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (guix build-system pyproject)
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#:use-module (guix build-system python)
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#:use-module (guix download)
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#:use-module (guix git-download)
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#:use-module (guix gexp)
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#:use-module (guix packages)
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#:use-module (gnu packages)
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#:use-module (gnu packages bash)
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#:use-module (gnu packages check)
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#:use-module (gnu packages freedesktop)
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#:use-module (gnu packages graph)
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#:use-module (gnu packages jupyter)
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#:use-module (gnu packages machine-learning)
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#:use-module (gnu packages python-build)
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#:use-module (gnu packages python-check)
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#:use-module (gnu packages python-crypto)
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#:use-module (gnu packages python-science)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages qt))
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(define-public python-orange-canvas-core
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(package
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(name "python-orange-canvas-core")
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(version "0.2.6")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "orange_canvas_core" version))
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(sha256
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(base32 "1h0p6p36h9vwmgs7xa7x0qa06zjxjyj8pr1p8d4iykbvl60s3dq0"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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;; tests: 227 passed, 4 skipped, 13 deselected, 15 warnings
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#:test-flags
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#~(list "-k" (string-join
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;; Tests fail with error: Failed: CALL ERROR: Exceptions
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;; caught in Qt event loop.
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(list "not test_create_new_window"
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"test_dont_load_swp_on_new_window"
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"test_editlinksnode"
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"test_links_edit"
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"test_links_edit_widget"
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"test_new_window"
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"test_toolbox"
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"test_widgettoolgrid"
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;; AssertionError: Lists differ
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"test_create_normal"
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"test_create_on_demand")
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" and not "))
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'relax-requirements
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(lambda _
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(substitute* "setup.py"
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;; Relax hard requirment of PIP.
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((".*pip>=18.0.*") ""))))
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(add-before 'check 'pre-check
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(lambda _
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(setenv "HOME" "/tmp")
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(setenv "QT_QPA_PLATFORM" "offscreen"))))))
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(native-inputs
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(list python-pytest
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python-pytest-qt
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python-setuptools
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python-trubar))
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(propagated-inputs
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(list python-anyqt
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python-commonmark
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python-dictdiffer
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python-docutils
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python-numpy
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python-packaging
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python-qasync
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python-requests
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python-requests-cache
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python-truststore
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python-typing-extensions))
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(home-page "https://github.com/biolab/orange-canvas-core")
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(synopsis "Core component of Orange Canvas")
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(description
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"Orange Canvas Core is a framework for building graphical user interfaces
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for editing workflows. It is a component used to build the Orange Canvas
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data-mining application.")
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(license license:gpl3)))
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(define-public python-orange-widget-base
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(package
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(name "python-orange-widget-base")
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(version "4.25.1")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "orange_widget_base" version))
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(sha256
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(base32 "1vms6bf96dnx5ban30xd0r0ipc318iq9q2wwgnazphf4hic8vxzi"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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#:test-flags
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#~(list "-k" (string-join
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(list
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;; KeyError: 'HTML (*.html)'
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"not test_save_report_html"
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;; KeyError: 'PDF (*.pdf)'
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"test_save_report_pdf"
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;; AssertionError: False is not true
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"test_menu")
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" and not "))
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#:phases
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#~(modify-phases %standard-phases
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(add-before 'check 'pre-check
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(lambda _
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(setenv "HOME" "/tmp")
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(setenv "QT_QPA_PLATFORM" "offscreen"))))))
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(native-inputs
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(list python-pytest
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python-setuptools
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python-trubar
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python-wheel))
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(propagated-inputs
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(list python-anyqt
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python-matplotlib
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python-orange-canvas-core
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python-pyqtgraph
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python-typing-extensions))
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(home-page "https://github.com/biolab/orange-widget-base")
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(synopsis "Base Widget for Orange Canvas")
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(description
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"Orange Widget Base provides a base widget component for a interactive
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GUI based workflow. It is primarily used in the Orange framework.")
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(license license:gpl3+)))
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(define-public orange
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(package
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(name "orange")
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;; XXX: The latest commit provides comparability with GCC 14, revert to
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;; git tag in the next refresh cycle.
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(properties '((commit . "44e66283aff4132614ef64a877f9ceef963588a7")
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(revision . "0")))
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(version (git-version "3.39.0"
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(assoc-ref properties 'revision)
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(assoc-ref properties 'commit)))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/biolab/orange3")
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(commit (assoc-ref properties 'commit))))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0d2ws64y8chj77yw689pr98wndpiapbh0msxyjah5ki8lygflizs"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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;; TODO: Figure out how to enable/fix tests: ImportError: cannot import
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;; name '_variable' from partially initialized module 'Orange.data'
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#:tests? #f
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#:test-backend #~'unittest
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#:test-flags #~(list "-v" "Orange.tests" "Orange.widgets.tests")
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#:phases
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#~(modify-phases %standard-phases
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(add-before 'check 'pre-check
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;; Tests need a writable home.
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(lambda _
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(setenv "HOME" "/tmp")
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(setenv "QT_QPA_PLATFORM" "offscreen")))
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(add-after 'wrap 'wrap-executable
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;; Ensure that icons are found at runtime.
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(lambda _
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(wrap-program (string-append #$output "/bin/orange-canvas")
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`("QT_PLUGIN_PATH" prefix
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,(list (string-append
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(string-join
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(list #$(this-package-input "qtbase")
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#$(this-package-input "qtsvg")
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#$(this-package-input "qtwayland"))
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"/lib/qt6/plugins:")
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"/lib/qt6/plugins")))))))))
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(native-inputs
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(list python-cython
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python-recommonmark
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python-setuptools
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python-trubar))
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(inputs
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(list bash-minimal ;for wrap
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python-anyqt
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python-baycomp
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python-bottleneck
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python-chardet
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python-httpx
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python-joblib
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python-keyring
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python-keyrings-alt
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python-louvain
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python-matplotlib
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python-networkx
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python-numpy
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python-openpyxl
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python-opentsne
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python-orange-canvas-core
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python-orange-widget-base
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python-packaging
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python-pandas
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python-pygments
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python-pyqt-6
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python-pyqtgraph
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python-pyqtwebengine-6
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python-pyyaml
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python-qtconsole
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python-requests
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python-scikit-learn
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python-scipy
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python-serverfiles
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python-xgboost
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python-xlrd
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python-xlsxwriter
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qtbase
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qtsvg
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qtwayland
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xdg-utils))
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(home-page "https://orangedatamining.com/")
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(synopsis "Component-based data mining framework")
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(description
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"Orange is a component-based, graphical framework for machine learning,
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data analysis, data mining and data visualization.")
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(license license:gpl3+)))
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(define-public python-serverfiles
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(package
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(name "python-serverfiles")
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(version "0.3.1")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "serverfiles" version))
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(sha256
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(base32 "1qgbzgnaxj4wsp2rdas53qxsh0j7xpibq25w6lviwyaqwwrgq42y"))))
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(build-system python-build-system)
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(propagated-inputs
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(list python-requests))
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(home-page "https://github.com/biolab/serverfiles")
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(synopsis "Utility to access files on a HTTP server and store them locally")
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(description
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"This package provides an utility that accesses files on a HTTP server
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and stores them locally for reuse. It is primarily used by the Orange
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framework.")
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(license license:gpl3+)))
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