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The check phase was failing with:
starting phase `check'
make: Entering directory '...drv-0/python-pysam-0.15.1-checkout/tests/pysam_data'
samtools faidx ex1.fa
samtools import ex1.fa.fai ex1.sam.gz ex1.bam
[main] "samtools import" has been removed. Please use "samtools view" instead.
make: *** [Makefile:56: ex1.bam] Error 1
* gnu/packages/bioinformatics.scm (python-pysam): Update to version 0.16.0.1.
[phases]{check}: Delete a couple more failing test files.
[native-inputs]: Add python-pytest.
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| build | ||
| installer | ||
| machine | ||
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| system | ||
| tests | ||
| artwork.scm | ||
| bootloader.scm | ||
| ci.scm | ||
| image.scm | ||
| installer.scm | ||
| local.mk | ||
| machine.scm | ||
| packages.scm | ||
| services.scm | ||
| system.scm | ||
| tests.scm | ||