Ricardo Wurmus
|
28d340ced8
|
gnu: r-fpc: Update to 2.2-14.
* gnu/packages/cran.scm (r-fpc): Update to 2.2-14.
Change-Id: I5e38e38d331a1b9a5d729659a2944f62c93116be
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2026-01-23 11:30:39 +01:00 |
|
Ricardo Wurmus
|
7a4421574b
|
gnu: r-blob: Update to 1.3.0.
* gnu/packages/cran.scm (r-blob): Update to 1.3.0.
Change-Id: I4364109ba8d6e121ee8de8419b99db68d5509e50
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2026-01-23 11:30:39 +01:00 |
|
Ricardo Wurmus
|
21834ea62e
|
gnu: r-netgsa: Update to 4.0.7.
* gnu/packages/bioconductor.scm (r-netgsa): Update to 4.0.7.
[propagated-inputs]: Remove r-org-hs-eg-db.
Change-Id: I3e40676dc5e4fdecf988c003d2dd2f338526e317
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2026-01-23 11:30:39 +01:00 |
|
Ricardo Wurmus
|
adee931e79
|
gnu: r-stringfish: Update to 0.18.0.
* gnu/packages/cran.scm (r-stringfish): Update to 0.18.0.
[properties]: Record updater-ignored-native-inputs.
[inputs]: Remove tbb-2020.
[native-inputs]: Add r-dplyr, r-rlang, and r-stringr.
Change-Id: If64356fc2f989e689fe4d6903b99e1d33ab6aad4
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
0aff377885
|
gnu: r-extradistr: Update to 1.10.0.2.
* gnu/packages/cran.scm (r-extradistr): Update to 1.10.0.2.
[propagated-inputs]: Add r-rcpparmadillo.
Change-Id: I764745d71a08ba8ad54c47482062f2e7714dcec4
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
6d28170c77
|
gnu: r-stringdist: Update to 0.9.17.
* gnu/packages/cran.scm (r-stringdist): Update to 0.9.17.
Change-Id: I7c4ffcb53de537833eb00792023b316c5e61aa4d
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
da37f3056d
|
gnu: r-vctrs: Update to 0.7.0.
* gnu/packages/cran.scm (r-vctrs): Update to 0.7.0.
Change-Id: Icdac7c8c9906a820a62a1cdc4b5bfe6114ba3fc7
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
ef900b0054
|
gnu: r-manipulatewidget: Update to 0.11.2.
* gnu/packages/cran.scm (r-manipulatewidget): Update to 0.11.2.
[native-inputs]: Add r-leaflet.
Change-Id: I1a342a002ffe825d1327d01a17d2ea53488244e5
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
cf68d3ff53
|
gnu: r-rcppannoy: Update to 0.0.23.
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.23.
[native-inputs]: Add r-rcpp and r-tinytest.
Change-Id: I8d5040fab624dca8ca68478a12ef90695b9b8270
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
0cc3eb6cac
|
gnu: r-rnifti: Update to 1.9.0.
* gnu/packages/cran.scm (r-rnifti): Update to 1.9.0.
[native-inputs]: Add r-testthat.
Change-Id: Idcb511e46f96b32feed2374a867e0f620aee79be
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
7632847c2c
|
gnu: r-zarrarray: Update to 1.0-2.3cc3e6a.
* gnu/packages/bioinformatics.scm (r-zarrarray): Update to 1.0-2.3cc3e6a.
[properties]: Record updater-extra-native-inputs.
[propagated-inputs]: Remove r-pizzarr; add r-rarr.
[native-inputs]: Add r-testthat.
[arguments]: Disable tests.
Change-Id: Id3a9b564c21ee779e4a46e02cd478d06d9dd5bc9
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
226da2ca10
|
gnu: r-pizzarr: Update to 0.1.0-2.5f47057.
* gnu/packages/bioinformatics.scm (r-pizzarr): Update to 0.1.0-2.5f47057.
Change-Id: Id5f24214e67dcc00093ceaa1d6f2297b6146aa51
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2026-01-23 11:30:38 +01:00 |
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Ricardo Wurmus
|
78b6d472be
|
gnu: r-qs: Skip another test.
* gnu/packages/cran.scm (r-qs)[arguments]: Remove qattributes_testing.R.
Change-Id: Ia2b6cb3c9ed959ff3c42c0bd52cae1615d0bd319
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2026-01-23 11:30:38 +01:00 |
|
Ricardo Wurmus
|
36d0937fa3
|
gnu: r-zarrdataframe: Update to 0.0.0-2.84c7db2.
* gnu/packages/bioinformatics.scm (r-zarrdataframe): Update to
0.0.0-2.84c7db2.
[properties]: Record updater-extra-native-inputs.
[propagated-inputs]: Remove r-pizzarr and r-zarrarray; add r-rarr.
[native-inputs]: Add r-testthat.
Change-Id: I65e3f52f85ccd297ddab320b4d951023d226bcdf
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
620d422301
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gnu: Add r-rarr.
* gnu/packages/bioconductor.scm (r-rarr): New variable.
Change-Id: Ia302b53f601295663246e66b9587c427a6ffd926
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2026-01-23 11:30:37 +01:00 |
|
Ricardo Wurmus
|
4717268f99
|
gnu: r-signac: Update to 1.16.0-1.f5a8411.
* gnu/packages/bioinformatics.scm (r-signac): Update to 1.16.0-1.f5a8411.
[properties]: Record updater-extra-native-inputs.
[propagated-inputs]: Add r-lifecycle and r-rlang.
Change-Id: Iadf5bb7cb05e691ea601caad91a90ad45dde7726
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2026-01-23 11:30:37 +01:00 |
|
Ricardo Wurmus
|
4aedbfc3f7
|
gnu: r-msnid: Disable one test.
* gnu/packages/bioconductor.scm (r-msnid)[arguments]: Add phase
'disable-bad-tests.
Change-Id: I188a069530c1aa7da663b438a079b736866e8bb5
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
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54da52a62c
|
gnu: r-tximeta: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.28.1.
Change-Id: Id10c5bdd793e8efcb051bce989fb06519bf0e739
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
300f9ac160
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gnu: r-bayesspace: Update to 1.20.2.
* gnu/packages/bioconductor.scm (r-bayesspace): Update to 1.20.2.
Change-Id: Ibec763f651410d4943e46abb2ea1e97870fa79cb
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
5d00090f05
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gnu: r-mscoreutils: Update to 1.22.1.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.22.1.
Change-Id: I6b53479c8388babf1fe039ce34770e9ef2f7f2db
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
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c9f948ce50
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gnu: r-sparsearray: Update to 1.10.8.
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.10.8.
Change-Id: I4d9b5eba4dbc7efdb779770249fb0a904700fcd2
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
99b2a8c5f9
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gnu: r-h5mread: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-h5mread): Update to 1.2.1.
Change-Id: I5a794952dffa1440516c82daebf5ee2e655fff1d
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2026-01-23 11:30:37 +01:00 |
|
Ricardo Wurmus
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5f01d1c422
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gnu: r-s4arrays: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.10.1.
Change-Id: Idd461cf7717c8d5ed2563c4649a0eb29254a1077
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
834075237e
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gnu: r-bioccheck: Update to 1.46.3.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.46.3.
Change-Id: Ib223054930edbf8220b4fbffc0847e712ef14748
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
bd6b3e6df6
|
gnu: r-ucsc-utils: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-ucsc-utils): Update to 1.6.1.
Change-Id: Idef0e80e438b58f47b272ecf1c1559070a5b3160
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
8a1fc11cdc
|
gnu: r-variancepartition: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.40.1.
[propagated-inputs]: Add r-reformulas.
Change-Id: Id6b3920b2d201249a55ccc7440e63b12039011a8
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2026-01-23 11:30:37 +01:00 |
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Ricardo Wurmus
|
86b2cbaaec
|
gnu: r-flowworkspace: Update to 4.22.1.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.22.1.
Change-Id: Ie25dc585234ca7f91fcbbc8782663eecd23e7f1a
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
faf7c1019c
|
gnu: r-ggcyto: Update to 1.38.1.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.38.1.
Change-Id: Idb7f65900f13935b1e2195ab75107a24b38794c4
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
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2b7cfa4c22
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gnu: r-flowcore: Update to 2.22.1.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.22.1.
Change-Id: I39861ca4db2858cdf872124935860436eebb4d0c
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
09a13d7978
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gnu: r-wppi: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-wppi): Update to 1.18.0.
Change-Id: I2cca7f805fd74973fdc2046ccaa151be8732248d
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
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33617f7077
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gnu: r-yapsa: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.36.1.
Change-Id: Ie96ba3c80116ca6174cc3b3265b220229b3c804d
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
151565ad4f
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gnu: r-clusterprofiler: Update to 4.18.4.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.18.4.
Change-Id: I9672e94f8ff1d0c91a5464c9c69910983756d53e
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
63d4849290
|
gnu: r-enrichplot: Update to 1.30.4.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.30.4.
[propagated-inputs]: Remove r-magrittr; add r-tidydr.
Change-Id: I87d3866091c21706dbeb2f0e5f3cbeee0169bbab
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
4c336c1f64
|
gnu: r-fgsea: Update to 1.36.2.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.36.2.
Change-Id: If6e95a2a2d86a21533059b2e8d393ea99b0cd94a
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
2536e5fc3e
|
gnu: r-ggtree: Update to 4.0.4.
* gnu/packages/bioconductor.scm (r-ggtree): Update to 4.0.4.
Change-Id: I30dd4c7202921e2985cdba14203af81a0999eb79
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
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b718d73c68
|
gnu: r-graph: Update to 1.88.1.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.88.1.
Change-Id: Ib9c224219e1cdfc88317dbd1ed603fbd5cf27737
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
ec6eacbaff
|
gnu: r-zellkonverter: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.20.1.
Change-Id: I770fb48f3b4f86a41a47e71987b67c86f97bd8bc
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
5763557995
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gnu: r-tximport: Update to 1.38.2.
* gnu/packages/bioconductor.scm (r-tximport): Update to 1.38.2.
Change-Id: I2fbda6da6a535d56ea69f6e7a2937e5a3f838e62
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
849d9c683e
|
gnu: r-systempiper: Update to 2.16.3.
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.16.3.
Change-Id: I7e8a52ebeb28d45b7ee2d4e85d1381f4a56cd916
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2026-01-23 11:30:36 +01:00 |
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Ricardo Wurmus
|
70482b6826
|
gnu: r-spectra: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-spectra): Update to 1.20.1.
Change-Id: I69f3974af0074b0237d2d02f7bb9096399ed5a3d
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
3de9a5ca19
|
gnu: r-transcriptr: Update to 1.38.3.
* gnu/packages/bioconductor.scm (r-transcriptr): Update to 1.38.3.
[propagated-inputs]: Remove r-e1071.
Change-Id: Ib4543931338d8faa6e93c181287f8aa3f2af6fdf
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
26046db011
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gnu: r-tcgautils: Update to 1.30.2.
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.30.2.
Change-Id: Iaa3ec26078a51c715e417e01395feb11281fa0fc
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
967fa3bebd
|
gnu: r-sesame: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-sesame): Update to 1.28.1.
Change-Id: I310b74b4403a66d797aad658706ebd0a508226b7
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
3183caa48a
|
gnu: r-rtracklayer: Update to 1.70.1.
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.70.1.
Change-Id: I3de097129c278a8667323f23f001a0788dac8fec
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
c5fb1699ae
|
gnu: r-rhdf5: Update to 2.54.1.
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.54.1.
Change-Id: I923a8119848614871fab5eef520a9e87ac71fd1a
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2026-01-23 11:30:35 +01:00 |
|
Ricardo Wurmus
|
419fa16cb1
|
gnu: r-rcy3: Update to 2.30.1.
* gnu/packages/bioconductor.scm (r-rcy3): Update to 2.30.1.
Change-Id: I805ed3b33d5a51b02a8a8d2a376e23fdab8e53ad
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
51366470dd
|
gnu: r-gsva: Update to 2.4.4.
* gnu/packages/bioconductor.scm (r-gsva): Update to 2.4.4.
[propagated-inputs]: Remove r-delayedmatrixstats; add r-memuse.
Change-Id: Ibcef712b3af99d367a84a45461e041b3a3ba4980
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
1983d614d8
|
gnu: r-genomicranges: Update to 1.62.1.
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.62.1.
Change-Id: I63bc5e3e2d55227f6988f76c9ca2684eb501a703
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
aa70aec7ba
|
gnu: r-genomeinfodb: Update to 1.46.2.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.46.2.
Change-Id: I68b54eec8c36cd149133f9c7827a6d544180529c
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2026-01-23 11:30:35 +01:00 |
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Ricardo Wurmus
|
de55053147
|
gnu: r-enhancedvolcano: Update to 1.28.2.
* gnu/packages/bioconductor.scm (r-enhancedvolcano): Update to 1.28.2.
[propagated-inputs]: Add r-scales.
Change-Id: I5b32e6f2dfb78380dd053bc8fbae763c9a467133
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2026-01-23 11:30:35 +01:00 |
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