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gnu: python-fenics-dijitso: Fix build.
* gnu/packages/simulation.scm (python-fenics-dijitso): Improve style,
fix build, use G-Expressions.
[phases] {check}: Respect tests? flag.
[native-inputs]: Add python-pytest-cov.
Change-Id: I4032735228d36366a7014b48e9d21606628c56a6
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a35e975e16
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1 changed files with 27 additions and 25 deletions
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@ -559,39 +559,41 @@ some support for generating and analysing traffic scenarios..")
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(name "python-fenics-dijitso")
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(version "2019.1.0")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "fenics-dijitso" version))
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(sha256
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(base32
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"0lhqsq8ypdak0ahr2jnyvg07yrqp6wicjxi6k56zx24wp3qg60sc"))))
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(origin
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(method url-fetch)
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(uri (pypi-uri "fenics-dijitso" version))
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(sha256
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(base32 "0lhqsq8ypdak0ahr2jnyvg07yrqp6wicjxi6k56zx24wp3qg60sc"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'build 'mpi-setup
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#$%openmpi-setup)
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(replace 'check
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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(setenv "HOME" "/tmp")
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(with-directory-excursion "test"
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;; Disable parallel tests to avoid race condition. See
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;; https://github.com/pytest-dev/pytest-cov/issues/237.
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(substitute* "runtests.sh"
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(("for p in 1 4 8 16; do") "for p in 1; do"))
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(invoke "./runtests.sh"))))))))
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(native-inputs
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(list python-pytest
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python-pytest-cov
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python-setuptools
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python-wheel))
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(inputs
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(list openmpi python-numpy))
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(native-inputs
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(list python-pytest python-setuptools python-wheel))
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(propagated-inputs
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(list python-mpi4py))
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'build 'mpi-setup
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,%openmpi-setup)
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(replace 'check
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(lambda* (#:key inputs #:allow-other-keys)
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(setenv "HOME" "/tmp")
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(with-guix-pytest-plugin inputs
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(with-directory-excursion "test"
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;; Disable parallel tests to avoid race condition. See
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;; https://github.com/pytest-dev/pytest-cov/issues/237.
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(substitute* "runtests.sh"
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(("for p in 1 4 8 16; do")
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"for p in 1; do"))
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(invoke "./runtests.sh"))))))))
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(home-page "https://bitbucket.org/fenics-project/dijitso/")
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(synopsis "Distributed just-in-time building of shared libraries")
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(description
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"Dijitso provides a core component of the @code{FEniCS} framework,
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"Dijitso provides a core component of the @code{FEniCS} framework,
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namely the just-in-time compilation of C++ code that is generated from
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Python modules. It is called from within a C++ library, using ctypes
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to import the dynamic shared library directly.
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