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gnu: packages/statistics: Sort.
* gnu/packages/statistics.scm (python-altair, and python-arviz): Sort variables alphabetically. Change-Id: If29cab57cff8385e5b3fb0d636c9c7419965c901
This commit is contained in:
Sharlatan Hellseher
parent
d340b071ce
commit
e3f2f81f12
1 changed files with 102 additions and 102 deletions
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@ -265,6 +265,108 @@ can be imported from spreadsheets, text files and database sources and it can
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be output in text, PostScript, PDF or HTML.")
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(license license:gpl3+)))
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(define-public python-altair
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(package
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(name "python-altair")
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(version "5.3.0")
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(source (origin
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(method git-fetch) ; no tests in PyPI
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(uri (git-reference
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(url "https://github.com/altair-viz/altair")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1lx3pkphi36pljns6jjxhyn9fbrana8f1y6gcg4yca48nvwlfssl"))))
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(build-system pyproject-build-system)
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(arguments
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(list #:test-flags
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;; XXX: This test file requires hard to package python-anywidgets.
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#~(list "--ignore=tests/test_jupyter_chart.py"
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"-k" (string-join
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(list
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;; these tests open an external connection.
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"not test_from_and_to_json_roundtrip"
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"test_render_examples_to_chart"
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;; introduces a circular dependency on altair-viewer.
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"not test_save_html"
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;; these tests require the vl-convert vega compiler
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"test_vegalite_compiler"
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"test_to_dict_with_format_vega"
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"test_to_json_with_format_vega"
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"test_to_url"
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"test_renderer_with_none_embed_options"
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"test_jupyter_renderer_mimetype")
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" and not "))))
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(propagated-inputs (list python-jinja2
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python-jsonschema
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python-numpy
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python-pandas
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python-setuptools
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python-toolz
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python-typing-extensions))
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(native-inputs (list python-black
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python-hatchling
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python-ipython
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python-pytest
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python-vega-datasets))
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(home-page "https://altair-viz.github.io/")
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(synopsis "Declarative statistical visualization library for Python")
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(description
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"Vega-Altair is a declarative statistical visualization library for Python.")
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(license license:expat)))
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(define-public python-arviz
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(package
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(name "python-arviz")
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(version "0.21.0")
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(source (origin
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(method git-fetch) ; PyPI misses some test files
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(uri (git-reference
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(url "https://github.com/arviz-devs/arviz")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"02bqpl61gzn65vhwspi6gx9ln2wlwh8xm418i8vhmls44rvszcxf"))))
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(build-system pyproject-build-system)
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(arguments
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;; FIXME: matplotlib tests fail because of the "--save" test flag.
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(list #:test-flags #~'("--ignore"
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"arviz/tests/base_tests/test_plots_matplotlib.py")
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'remove-radon
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(lambda _
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(delete-file
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;; This dataset is loaded remotely, it's not supposed to
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;; be copied locally.
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"arviz/data/example_data/code/radon/radon.json")))
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(add-before 'check 'write-permission
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(lambda _
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;; 3 tests require write permission.
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(setenv "HOME" "/tmp"))))))
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(native-inputs (list python-cloudpickle python-pytest))
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(propagated-inputs (list python-dm-tree
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python-h5netcdf
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python-matplotlib
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python-numpy
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python-packaging
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python-pandas
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python-scipy
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python-typing-extensions
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python-xarray
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python-xarray-einstats
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python-setuptools
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python-wheel))
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(home-page "https://github.com/arviz-devs/arviz")
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(synopsis "Exploratory analysis of Bayesian models")
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(description
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"ArviZ is a Python package for exploratory analysis of Bayesian models.
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It includes functions for posterior analysis, data storage, model checking,
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comparison and diagnostics.")
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(license license:asl2.0)))
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;; Update this package together with the set of recommended packages: r-boot,
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;; r-class, r-cluster, r-codetools, r-foreign, r-kernsmooth, r-lattice,
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;; r-mass, r-matrix, r-mgcv, r-nlme, r-nnet, r-rpart, r-spatial, r-survival.
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@ -908,57 +1010,6 @@ Keizer et al. (2013) <doi:10.1038/psp.2013.24>, and Jonsson et al.
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and Vega-Lite examples.")
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(license license:expat)))
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(define-public python-altair
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(package
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(name "python-altair")
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(version "5.3.0")
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(source (origin
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(method git-fetch) ; no tests in PyPI
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(uri (git-reference
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(url "https://github.com/altair-viz/altair")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1lx3pkphi36pljns6jjxhyn9fbrana8f1y6gcg4yca48nvwlfssl"))))
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(build-system pyproject-build-system)
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(arguments
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(list #:test-flags
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;; XXX: This test file requires hard to package python-anywidgets.
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#~(list "--ignore=tests/test_jupyter_chart.py"
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"-k" (string-join
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(list
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;; these tests open an external connection.
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"not test_from_and_to_json_roundtrip"
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"test_render_examples_to_chart"
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;; introduces a circular dependency on altair-viewer.
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"not test_save_html"
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;; these tests require the vl-convert vega compiler
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"test_vegalite_compiler"
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"test_to_dict_with_format_vega"
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"test_to_json_with_format_vega"
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"test_to_url"
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"test_renderer_with_none_embed_options"
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"test_jupyter_renderer_mimetype")
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" and not "))))
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(propagated-inputs (list python-jinja2
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python-jsonschema
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python-numpy
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python-pandas
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python-setuptools
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python-toolz
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python-typing-extensions))
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(native-inputs (list python-black
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python-hatchling
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python-ipython
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python-pytest
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python-vega-datasets))
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(home-page "https://altair-viz.github.io/")
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(synopsis "Declarative statistical visualization library for Python")
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(description
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"Vega-Altair is a declarative statistical visualization library for Python.")
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(license license:expat)))
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(define-public python-emcee
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(package
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(name "python-emcee")
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@ -1142,57 +1193,6 @@ is widely used in many areas of astrophysical research.")
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algorithms for evaluating Bayesian evidence.")
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(license license:expat)))
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(define-public python-arviz
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(package
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(name "python-arviz")
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(version "0.21.0")
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(source (origin
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(method git-fetch) ; PyPI misses some test files
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(uri (git-reference
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(url "https://github.com/arviz-devs/arviz")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"02bqpl61gzn65vhwspi6gx9ln2wlwh8xm418i8vhmls44rvszcxf"))))
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(build-system pyproject-build-system)
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(arguments
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;; FIXME: matplotlib tests fail because of the "--save" test flag.
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(list #:test-flags #~'("--ignore"
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"arviz/tests/base_tests/test_plots_matplotlib.py")
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'remove-radon
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(lambda _
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(delete-file
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;; This dataset is loaded remotely, it's not supposed to
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;; be copied locally.
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"arviz/data/example_data/code/radon/radon.json")))
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(add-before 'check 'write-permission
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(lambda _
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;; 3 tests require write permission.
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(setenv "HOME" "/tmp"))))))
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(native-inputs (list python-cloudpickle python-pytest))
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(propagated-inputs (list python-dm-tree
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python-h5netcdf
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python-matplotlib
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python-numpy
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python-packaging
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python-pandas
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python-scipy
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python-typing-extensions
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python-xarray
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python-xarray-einstats
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python-setuptools
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python-wheel))
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(home-page "https://github.com/arviz-devs/arviz")
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(synopsis "Exploratory analysis of Bayesian models")
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(description
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"ArviZ is a Python package for exploratory analysis of Bayesian models.
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It includes functions for posterior analysis, data storage, model checking,
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comparison and diagnostics.")
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(license license:asl2.0)))
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(define-public python-pymc
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(package
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(name "python-pymc")
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