diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index e4bad92e82d..c1e6244fbf4 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -3215,58 +3215,58 @@ the following purposes in mind: (license license:bsd-3))) (define-public python-scikit-survival - (package - (name "python-scikit-survival") - (version "0.26.0") - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/sebp/scikit-survival") - (commit (string-append "v" version)) - ;; TODO: This package contains a copy of Eigen in - ;; sksurv/linear_model/src. It would be good to figure out - ;; how to use our own Eigen package. - (recursive? #true))) - (file-name (git-file-name name version)) - (sha256 - (base32 "0r0xi9saz247ph6bgrc3iknq0m60d8rs4sl4mdv4s1zja80w1cp8")))) - (build-system pyproject-build-system) - (arguments - (list - ;; tests: 1013 passed, 105 warnings - #:test-flags - #~(list "--durations=10" ;to help in spotting long running tests - "--numprocesses" (number->string (min 4 (parallel-job-count)))) - #:phases - #~(modify-phases %standard-phases - (add-before 'build 'set-version - (lambda _ - (setenv "SETUPTOOLS_SCM_PRETEND_VERSION" - #$(version-major+minor version))))))) - (propagated-inputs - (list python-ecos - python-joblib - python-numexpr - python-numpy - python-osqp - python-pandas - python-scikit-learn - python-scipy)) - (native-inputs - (list python-cython - python-packaging - python-pytest - python-pytest-xdist - python-setuptools - python-setuptools-scm)) - (home-page "https://github.com/sebp/scikit-survival") - (synopsis "Survival analysis built on top of scikit-learn") - (description "Scikit-survival is a Python module for survival analysis + (package + (name "python-scikit-survival") + (version "0.26.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/sebp/scikit-survival") + (commit (string-append "v" version)) + ;; TODO: This package contains a copy of Eigen in + ;; sksurv/linear_model/src. It would be good to figure out + ;; how to use our own Eigen package. + (recursive? #true))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0r0xi9saz247ph6bgrc3iknq0m60d8rs4sl4mdv4s1zja80w1cp8")))) + (build-system pyproject-build-system) + (arguments + (list + ;; tests: 1013 passed, 105 warnings + #:test-flags + #~(list "--durations=10" ;to help in spotting long running tests + "--numprocesses" (number->string (min 4 (parallel-job-count)))) + #:phases + #~(modify-phases %standard-phases + (add-before 'build 'set-version + (lambda _ + (setenv "SETUPTOOLS_SCM_PRETEND_VERSION" + #$(version-major+minor version))))))) + (propagated-inputs + (list python-ecos + python-joblib + python-numexpr + python-numpy + python-osqp + python-pandas + python-scikit-learn + python-scipy)) + (native-inputs + (list python-cython + python-packaging + python-pytest + python-pytest-xdist + python-setuptools + python-setuptools-scm)) + (home-page "https://github.com/sebp/scikit-survival") + (synopsis "Survival analysis built on top of scikit-learn") + (description "Scikit-survival is a Python module for survival analysis built on top of scikit-learn. It allows doing survival analysis while utilizing the power of scikit-learn, e.g., for pre-processing or doing cross-validation.") - (license license:gpl3+))) + (license license:gpl3+))) (define-public python-scipy (package