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gnu: Add python-astrodata.

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* gnu/packages/astronomy.scm (python-astrodata): New variable.

Change-Id: If3552abcddda7f44ec620778e498383894053fda
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Sharlatan Hellseher 2025-11-11 23:17:32 +00:00
parent 02a6678052
commit 26e10e2541
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1 changed files with 120 additions and 0 deletions
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@ -2724,6 +2724,126 @@ a path (for moving targets) and combining cutouts
@end itemize")
(license license:bsd-3)))
(define-public python-astrodata
(package
(name "python-astrodata")
(version "2.10.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/GeminiDRSoftware/astrodata")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "141qymnirjlrbjzl26wx2dvrr0glva8q74cwxi575a29aa0byrhv"))))
(build-system pyproject-build-system)
(arguments
(list
;; tests: 985 passed, 7 skipped, 58 deselected
#:test-flags
;; Tests depend on unpackaged DRAGON's module "gemini_instruments".
#~(list "--ignore=tests/integration/"
;; Access to https://archive.gemini.edu/file is required to
;; download test data.
"--deselect=tests/unit/test_provenance.py::test_convert_provhistory"
#$@(map (lambda (test) (string-append "--deselect="
"tests/unit/"
"test_fits.py::"
test))
(list "test_attributes"
"test_can_add_and_del_extension"
"test_copy"
"test_crop"
"test_crop_ext"
"test_do_arith_and_retain_features"
"test_extver3"
"test_from_hdulist"
"test_header"
"test_header_collection"
"test_paths"
"test_phu"
"test_read_no_extensions"
"test_set_a_keyword_on_phu_deprecated"
"test_slice"
"test_slice_data"
"test_slice_multiple"
"test_slice_single_element"))
#$@(map (lambda (test) (string-append "--deselect="
"tests/unit/"
"test_object_construction.py::"
test))
(list "test_append_array_to_extension_with_arbitrary_name"
"test_append_array_to_extension_with_name_sci"
"test_append_array_to_root_no_name"
"test_append_array_to_root_with_arbitrary_name"
"test_append_array_to_root_with_name_sci"
"test_append_dq_var"
"test_append_nddata_to_root_no_name"
"test_append_nddata_to_root_with_arbitrary_name"
"test_append_non_single_slice"
"test_append_single_slice"
"test_append_slice_to_extension"
"test_append_whole_instance"
"test_can_read_data"
"test_delete_arbitrary_attribute_from_ad"
"test_delete_named_associated_extension"))
#$@(map (lambda (test) (string-append "--deselect="
"tests/unit/"
"test_testing.py::"
test))
(list "test_ADCompare_header_matching"
"test_ADCompare_header_matching_flip"
"test_ADCompare_init"
"test_ADCompare_missing_refcat"
"test_ADCompare_numext"
"test_ADCompare_run_comparison"
"test_ADCompare_wcs"
"test_ad_compare"
"test_download_file_path_subpath"
"test_download_from_archive_None_sub_path"
"test_download_memory_leaks"
"test_warning_if_no_cache_path"))
#$@(map (lambda (test) (string-append "--deselect="
"tests/unit/"
"test_wcs.py::"
test))
(list "test_gwcs_creation"
"test_loglinear_axis"
"test_reading_and_writing_sliced_image"
"test_remove_unused_world_axis"))
;; assert 1 == 0
"-k" (string-append "not test_script_executes[script0-]"
" and not test_script_executes[script1-]"))))
(native-inputs
(list python-poetry-core
python-objgraph
python-pytest
python-pytest-doctestplus))
(propagated-inputs
(list python-asdf-3
python-astropy-6
python-gwcs-0.21
python-jsonschema
python-numpy))
(home-page "https://github.com/GeminiDRSoftware/astrodata")
(synopsis "Managing astronomical data through a uniform interface")
(description
"@code{astrodata} is a package for managing astronomical data through a
uniform interface. It is designed to be used with the
@url{https://www.astropy.org/, Astropy package}. @code{astrodata} was created
for use as part of the @url{https://github.com/GeminiDRSoftware/DRAGONS,
DRAGONS} data reduction pipeline, but it is now implemented to be useful for
any astronomical data reduction or analysis project.
Unlike managing files using the @code{astropy.io.fits} package alone,
@code{astrodata} is designed to be extendible to any data format, and to
parse, respond to, and store metadata in a consistent, intentional way. This
makes it especially useful for managing data from multiple instruments,
telescopes, and data generation utilities.")
(license license:bsd-3)))
(define-public python-astrodendro
(package
(name "python-astrodendro")