diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index f9074d00a45..34619838505 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -20273,6 +20273,19 @@ annotations and ontologies.") (base32 "1sp3f72rzlr822dxx42bswynrwwfx6f520hdhfdikqp13p2y4044")))) (properties `((upstream-name . "ABAEnrichment"))) + (arguments + (list + #:phases + '(modify-phases %standard-phases + ;; These deprecated procedures have been removed in testthat. + (add-after 'unpack 'testthat-compatibility + (lambda _ + (substitute* '("tests/testthat/test_0load_by_name.R" + "tests/testthat/test_aba_enrich.R" + "tests/testthat/test_detect_identifier.R" + "tests/testthat/test_get_superstructures.R") + (("is_true\\(\\)") "expect_true") + (("is_false\\(\\)") "expect_false"))))))) (build-system r-build-system) (propagated-inputs (list r-abadata